Ecosystem Science & Modeling
Permanent URI for this communityhttps://hdl.handle.net/1969.6/89063
Browse
Browsing Ecosystem Science & Modeling by Author "Cai, Wei-Jun"
Now showing 1 - 11 of 11
- Results Per Page
- Sort Options
Item Alkalinity distribution in the western North Atlantic Ocean margins(2010-08-13) Cai, Wei-Jun; Hu, Xinping; Huang, Wei-Jen; Jiang, Li-Qing; Wang, Yongchen; Peng, Tsung-Hung; Zhang, XinTotal alkalinity (TA) distribution and its relationship with salinity (S) along the western North Atlantic Ocean (wNAO) margins from the Labrador Sea to tropical areas are examined by this study. Based on the observed TA-S patterns, the mixing process that control alkalinity distribution in these areas can be categorized into a spectrum of patterns that are bracketed by two extreme mixing types, i.e., alongshore current dominated and river-dominated. Alongshore current-dominated mixing processes exhibit a segmented mixing line with a shared mid-salinity end-member. In such cases (i.e., Labrador Sea, Gulf of Maine, etc.), the y-intercept of the high salinity segment of the mixing line is generally higher than the local river alkalinity values, and it reflects the mixing history of the alongshore current. In contrast, in river-dominated mixing (Amazon River, Caribbean Sea, etc.), good linear relationships between alkalinity and salinity are generally observed, and the zero salinity intercepts of the TA-S regressions roughly match those of the regional river alkalinity values. TA-S mixing lines can be complicated by rapid changes in the river end-member value and by another river nearby with a different TA value (e.g., Mississippi-Atchafalaya/Gulf of Mexico). In the wNAO margins, regression intercepts and river end-member vale have a clear latitudinal distribution pattern, increasing from a low of ~300 mol kg-1 in the Amazon River plume to a high value between ~500-1100 mol kg-1 in the middle and high latitude margins. The highest value of ~2400 mol kg-1 is observed in the Mississippi River influenced areas. In addition to mixing control, biological processes such a calcification and benthic alkalinity production may also affect ocean margin alkalinity distribution. Therefore, deriving inorganic carbon system information in coastal oceans using alkalinity-salinity relationships, in particular, those of generic nature, may lead to significant errors.Item An assessment of ocean margin anaerobic processes on oceanic alkalinity budget(Global Biogeochem, 2011-07-08) Hu, Xinping; Cai, Wei-JunRecent interest in the ocean’s capacity to absorb atmospheric CO2 and buffer the accompanying “ocean acidification” has prompted discussions on the magnitude of ocean margin alkalinity production via anaerobic processes. However, available estimates are largely based on gross reaction rates or misconceptions regarding reaction stoichiometry. In this paper, we argue that net alkalinity gain does not result from the internal cycling of nitrogen and sulfur species or from the reduction of metal oxides. Instead, only the processes that involve permanent loss of anaerobic remineralization products, i.e., nitrogen gas from net denitrification and reduced sulfur (i.e., pyrite burial) from net sulfate reduction, could contribute to this anaerobic alkalinity production. Our revised estimate of net alkalinity production from anaerobic processes is on the order of 4–5 Tmol yr−1 in global ocean margins that include both continental shelves and oxygen minimum zones, significantly smaller than the previously estimated rate of 16–31 Tmol yr−1 . In addition, pyrite burial in coastal habitats (salt marshes, mangroves, and seagrass meadows) may contribute another 0.1–1.1 Tmol yr−1 , although their long‐term effect is not yet clear under current changing climate conditions and rising sea levels. Finally, we propose that these alkalinity production reactions can be viewed as “charge transfer” processes, in which negative charges of nitrate and sulfate ions are converted to those of bicarbonate along with a net loss of these oxidative anions.Item Best Practice Data Standards for Discrete Chemical Oceanographic Observations(Frontiers in Marine Science, 2022-01-21) Jiang, Li-Qing; Pierrot, Denis; Wanninkhof, Rik; Feely, Richard A.; Tilbrook, Bronte; Alin, Simone; Barbero, Leticia; Byrne, Robert H.; Carter, Brendan R.; Dickson, Andrew G.; Gattuso, Jean-Pierre; Greeley, Dana; Hoppema, Mario; Humphreys, Matthew P.; Karstensen, Johannes; Lange, Nico; Lauvset, Siv K.; Lewis, Ernie R.; Olsen, Are; Pérez, Fiz F.; Sabine, Christopher; Sharp, Jonathan D.; Tanhua, Toste; Trull, Thomas W.; Velo, Anton; Allegra, Andrew J.; Barker, Paul; Burger, Eugene; Cai, Wei-Jun; Chen, Chen-Tung A.; Cross, Jessica; Garcia, Hernan; Hernandez-Ayon, Jose Martin; Hu, Xinping; Kozyr, Alex; Langdon, Chris; Lee, Kitack; Salisbury, Joe; Wang, Zhaohui Aleck; Xue, LiangEffective data management plays a key role in oceanographic research as cruise-based data, collected from different laboratories and expeditions, are commonly compiled to investigate regional to global oceanographic processes. Here we describe new and updated best practice data standards for discrete chemical oceanographic observations, specifically those dealing with column header abbreviations, quality control flags, missing value indicators, and standardized calculation of certain properties. These data standards have been developed with the goals of improving the current practices of the scientific community and promoting their international usage. These guidelines are intended to standardize data files for data sharing and submission into permanent archives. They will facilitate future quality control and synthesis efforts and lead to better data interpretation. In turn, this will promote research in ocean biogeochemistry, such as studies of carbon cycling and ocean acidification, on regional to global scales. These best practice standards are not mandatory. Agencies, institutes, universities, or research vessels can continue using different data standards if it is important for them to maintain historical consistency. However, it is hoped that they will be adopted as widely as possible to facilitate consistency and to achieve the goals stated above.Item Continental shelves as a variable but increasing global sink for atmospheric carbon dioxide(2018-01-31) Laruelle, Goulven G.; Cai, Wei-Jun; Hu, Xinping; Gruber, Nicolas; Mackenzie, Fred T.; Regnier, PierreIt has been speculated that the partial pressure of carbon dioxide (pCO2) in shelf waters may lag the rise in atmospheric CO2. Here, we show that this is the case across many shelf regions, implying a tendency for enhanced shelf uptake of atmospheric CO2. This result is based on analysis of long-term trends in the air–sea pCO2 gradient (ΔpCO2) using a global surface ocean pCO2 database spanning a period of up to 35 years. Using wintertime data only, we find that ΔpCO2 increased in 653 of the 825 0.5° cells for which a trend could be calculated, with 325 of these cells showing a significant increase in excess of +0.5 μatm yr−1 (p < 0.05). Although noisier, the deseasonalized annual data suggest similar results. If this were a global trend, it would support the idea that shelves might have switched from a source to a sink of CO2 during the last century.Item Coral Energy Reserves and Calcification in a High-CO2 World at Two Temperatures(2013-10-11) Schoepf, Verena; Grottoli, Andréa G.; Warner, Mark E.; Cai, Wei-Jun; Melman, Todd F.; Hoadley, Kenneth D.; Pettay, D. Tye; Hu, Xinping; Li, Qian; Xu, Hui; Wang, Yongchen; Matsui, Yohei; Baumann, Justin H.Rising atmospheric CO2 concentrations threaten coral reefs globally by causing ocean acidification (OA) and warming. Yet, the combined effects of elevated pCO2 and temperature on coral physiology and resilience remain poorly understood. While coral calcification and energy reserves are important health indicators, no studies to date have measured energy reserve pools (i.e., lipid, protein, and carbohydrate) together with calcification under OA conditions under different temperature scenarios. Four coral species, Acropora millepora, Montipora monasteriata, Pocillopora damicornis, Turbinaria reniformis, were reared under a total of six conditions for 3.5 weeks, representing three pCO2 levels (382, 607, 741 µatm), and two temperature regimes (26.5, 29.0°C) within each pCO2 level. After one month under experimental conditions, only A. millepora decreased calcification (−53%) in response to seawater pCO2 expected by the end of this century, whereas the other three species maintained calcification rates even when both pCO2 and temperature were elevated. Coral energy reserves showed mixed responses to elevated pCO2 and temperature, and were either unaffected or displayed nonlinear responses with both the lowest and highest concentrations often observed at the mid-pCO2 level of 607 µatm. Biweekly feeding may have helped corals maintain calcification rates and energy reserves under these conditions. Temperature often modulated the response of many aspects of coral physiology to OA, and both mitigated and worsened pCO2 effects. This demonstrates for the first time that coral energy reserves are generally not metabolized to sustain calcification under OA, which has important implications for coral health and bleaching resilience in a high-CO2 world. Overall, these findings suggest that some corals could be more resistant to simultaneously warming and acidifying oceans than previously expected.Item Microelectrode characterization of coral daytime interior pH and carbonate chemistry(Nature Communications, 2016-04-04) Cai, Wei-Jun; Ma, Yuening; Hopkinson, Brian M.; Grottoli, Andrea G.; Warner, Mark E.; Ding, Qian; Hu, Xinping; Yuan, Xiangchen; Schoepf, Verena; Xu, Hui; Han, Chenhua; Melman, Todd F.; Hoadley, Kenneth D.; Pettay, D. Tye; Matsui, Yohei; Baumann, Justin H.; Levas, Stephen; Ying, Ye; Wang, YongchenReliably predicting how coral calcification may respond to ocean acidification and warming depends on our understanding of coral calcification mechanisms. However, the concentration and speciation of dissolved inorganic carbon (DIC) inside corals remain unclear, as only pH has been measured while a necessary second parameter to constrain carbonate chemistry has been missing. Here we report the first carbonate ion concentration ([CO3 2 ]) measurements together with pH inside corals during the light period. We observe sharp increases in [CO3 2 ] and pH from the gastric cavity to the calcifying fluid, confirming the existence of a proton (H þ ) pumping mechanism. We also show that corals can achieve a high aragonite saturation state (Oarag) in the calcifying fluid by elevating pH while at the same time keeping [DIC] low. Such a mechanism may require less H þ -pumping and energy for upregulating pH compared with the high [DIC] scenario and thus may allow corals to be more resistant to climate change related stressors.Item Microelectrode characterization of coral daytime interior pH and carbonate chemistry(2016-04-04) Cai, Wei-Jun; Ma, Yuening; Hopkinson, Brian M.; Grottoli, Andréa G.; Warner, Mark E.; Ding, Qian; Hu, Xinping; Yuan, Xiangchen; Schoepf, Verena; Xu, Hui; Han, Chenhua; Melman, Todd F.; Hoadley, Kenneth D.; Pettay, D. Tye; Matsui, Yohei; Baumann, Justin H.; Levas, Stephen; Ying, Ye; Wang, YongchenReliably predicting how coral calcification may respond to ocean acidification and warming depends on our understanding of coral calcification mechanisms. However, the concentration and speciation of dissolved inorganic carbon (DIC) inside corals remain unclear, as only pH has been measured while a necessary second parameter to constrain carbonate chemistry has been missing. Here we report the first carbonate ion concentration ([CO32−]) measurements together with pH inside corals during the light period. We observe sharp increases in [CO32−] and pH from the gastric cavity to the calcifying fluid, confirming the existence of a proton (H+) pumping mechanism. We also show that corals can achieve a high aragonite saturation state (Ωarag) in the calcifying fluid by elevating pH while at the same time keeping [DIC] low. Such a mechanism may require less H+-pumping and energy for upregulating pH compared with the high [DIC] scenario and thus may allow corals to be more resistant to climate change related stressors.Item Organic carbon fluxes mediated by corals at elevated pCO2 and temperature(Marine Ecology Progress Series, 2015-01-20) Levas, Stephen; Grottoli, Andréa G.; Warner, Mark E.; Cai, Wei-Jun; Bauer, James; Schoepf, Verena; Baumann, Justin H.; Matsui, Yohei; Gearing, Colin; Melman, Todd F.; Hoadley, Kenneth D.; Pettay, Daniel T.; Hu, Xinping; Li, Qian; Xu, Hui; Wang, YongchenIncreasing ocean acidification (OA) and seawater temperatures pose significant threats to coral reefs globally. While the combined impacts of OA and seawater temperature on coral biology and calcification in corals have received significant study, research to date has largely neglected the individual and combined effects of OA and seawater temperature on coral-mediated organic carbon (OC) fluxes. This is of particular concern as dissolved and particulate OC (DOC and POC, respectively) represent large pools of fixed OC on coral reefs. In the present study, coral-mediated POC and DOC, and the sum of these coral-mediated flux rates (total OC, TOC = DOC + POC) as well as the relative contributions of each to coral metabolic demand were determined for 2 species of coral, Acropora millepora and Turbinaria reniformis, at 2 levels of pCO2 (382 and 741 µatm) and seawater temperatures (26.5 and 31.0°C). Independent of temperature, DOC fluxes decreased significantly with increases in pCO2 in both species, resulting in more DOC being retained by the corals and only representing between 19 and 6% of TOC fluxes for A. millepora and T. reniformis. At the same time, POC and TOC fluxes were unaffected by elevated temperature and/or pCO2. These findings add to a growing body of evidence that certain species of coral may be less at risk to the impacts of OA and temperature than previously thought.Item Physiological response to elevated temperature and pCO2 varies across four Pacific coral species: Understanding the unique host+symbiont response(2015-12-16) Hoadley, Kenneth D.; Pettay, D. Tye; Grottoli, Andréa G.; Cai, Wei-Jun; Melman, Todd F.; Schoepf, Verena; Hu, Xinping; Li, Qian; Xu, Hui; Wang, Yongchen; Matsui, Yohei; Baumann, Justin H.; Warner, Mark E.The physiological response to individual and combined stressors of elevated temperature and pCO2 were measured over a 24-day period in four Pacific corals and their respective symbionts (Acropora millepora/Symbiodinium C21a, Pocillopora damicornis/Symbiodinium C1c-d-t, Montipora monasteriata/Symbiodinium C15 and Turbinaria reniformis/Symbiodinium trenchii). Multivariate analyses indicated that elevated temperature played a greater role in altering physiological response, with the greatest degree of change occurring within M. monasteriata and T. reniformis. Algal cellular volume, protein and lipid content all increased for M. monasteriata. Likewise, S. trenchii volume and protein content in T. reniformis also increased with temperature. Despite decreases in maximal photochemical efficiency, few changes in biochemical composition (i.e. lipids, proteins and carbohydrates) or cellular volume occurred at high temperature in the two thermally sensitive symbionts C21a and C1c-d-t. Intracellular carbonic anhydrase transcript abundance increased with temperature in A. millepora but not in P. damicornis, possibly reflecting differences in host mitigated carbon supply during thermal stress. Importantly, our results show that the host and symbiont response to climate change differs considerably across species and that greater physiological plasticity in response to elevated temperature may be an important strategy distinguishing thermally tolerant vs. thermally sensitive species.Item Seasonal Mixing and Biological Controls of the Carbonate System in a River-Dominated Continental Shelf Subject to Eutrophication and Hypoxia in the Northern Gulf of Mexico(Frontiers in Marine Science, 2021-03-26) Huang, Wei-Jen; Cai, Wei-Jun; Hu, XinpingLarge rivers export a large amount of dissolved inorganic carbon (DIC) and nutrients to continental shelves; and subsequent river-to-sea mixing, eutrophication, and seasonal hypoxia (dissolved oxygen < 2 mg⋅L–1) can further modify DIC and nutrient distributions and fluxes. However, quantitative studies of seasonal carbonate variations on shelves are still insufficient. We collected total alkalinity (TA), DIC, and NO3– data from nine cruises conducted between 2006 and 2010 on the northern Gulf of Mexico continental shelf, an area strongly influenced by the Mississippi and Atchafalaya Rivers. We applied a three-end-member model (based on salinity and potential alkalinity) to our data to remove the contribution of physical mixing to DIC and nitrate distribution patterns and to derive the net in situ removal of DIC and nitrate (ΔDIC and ΔNO3–, respectively). Systematic analyses demonstrated that the seasonal net DIC removal in the near-surface water was strong during summer and weak in winter. The peak in net DIC production in the near-bottom, subsurface waters of the inner and middle sections of the shelf occurred between July and September; it was coupled, but with a time lag, to the peak in the net DIC removal that occurred in the near-surface waters in June. A similar 2-month delay (i.e., January vs. November) could also be observed between their minima. A detailed examination of the relationship between ΔDIC and ΔNO3– demonstrates that net biological activity was the dominant factor of DIC removal and addition. Other effects, such as air–sea CO2 gas exchange, wetland exports, CaCO3 precipitation, and a regional variation of the Redfield ratio, were relatively minor. We suggest that the delayed coupling between eutrophic surface and hypoxic bottom waters reported here may also be seen in the carbon and nutrient cycles of other nutrient-rich, river-dominated ocean margins worldwide.Item Time of Emergence of Surface Ocean Carbon Dioxide Trends in the North American Coastal Margins in Support of Ocean Acidification Observing System Design(2019-03-08) Turk, Daniela; Wang, Hongjie; Hu, Xinping; Gledhill, Dwight K.; Wang, Zhaohui Aleck; Jiang, Liqing; Cai, Wei-JunTime of Emergence (ToE) is the time when a signal emerges from the noise of natural variability. Commonly used in climate science for the detection of anthropogenic forcing, this concept has recently been applied to geochemical variables, to assess the emerging times of anthropogenic ocean acidification (OA), mostly in the open ocean using global climate and Earth System Models. Yet studies of OA variables are scarce within costal margins, due to limited multidecadal time-series observations of carbon parameters. ToE provides important information for decision making regarding the strategic configuration of observing assets, to ensure they are optimally positioned either for signal detection and/or process elicitation and to identify the most suitable variables in discerning OA-related changes. Herein, we present a short overview of ToE estimates on an OA variable, CO2 fugacity f(CO2,sw), in the North American ocean margins, using coastal data from the Surface Ocean CO2 Atlas (SOCAT) V5. ToE suggests an average theoretical timeframe for an OA signal to emerge, of 23(±13) years, but with considerable spatial variability. Most coastal areas are experiencing additional secular and/or multi-decadal forcing(s) that modifies the OA signal, and such forcing may not be sufficiently resolved by current observations. We provide recommendations, which will help scientists and decision makers design and implement OA monitoring systems in the next decade, to address the objectives of OceanObs19 (http://www.oceanobs19.net) in support of the United Nations Decade of Ocean Science for Sustainable Development (2021–2030) (https://en.unesco.org/ocean-decade) and the Sustainable Development Goal (SDG) 14.3 (https://sustainabledevelopment.un.org/sdg14) target to “Minimize and address the impacts of OA.”